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DupTree Download

DupTree can be cited as follows:
DupTree: A program for large-scale phylogenetic analyses using gene tree parsimony
   Andre Wehe, Mukul S. Bansal, J. G. Burleigh, Oliver Eulenstein.
   Bioinformatics, 24(13): 1540-1541, 2008.

NOTE: DupTree is now also available as part of the software package iGTP, which is a graphical program for performing gene tree parsimony analysis under the duplication, duplication+loss, and deep coalescence reconciliation cost models. You can read more about iGTP here.

Contact: Andre Wehe ( or Mukul Bansal (