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Exact Algorithm Simulation Study

(Comparison among MRF,MRP and MinCutSupertree)

  • Parameters for generating model trees
Taxonomic Diversification Model:  Generate Branch lengths on trees: 
Rate Mode:  Number of Model Tree used: 
Number of Taxa:  Seed:
Minimum Rate:  Maximum Rate: 
Start Rate:  Change Rate:

  • Parameters for generating sequences
Model Used for Generating Seqs: 
Length of Sequence: 
Gamma Rate heterogeneity:  Scale Branch Length: 

  • Other Parameters
Prob. of deleting taxon :  Number of source trees: 
Consensus Method used for selecting a Source Tree: Consensus Method used for selecting a Supertree:

 

Computational Biology Laboratory
Department of Computer Science
Iowa State University
Ames, IA 50011-1040
phone: +1-515-294-4377, fax: +1-515-294-0258
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